WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK945.3.1 Sequence Name  ZK945.3.1
Length (nt)  2510   Chromosome Location  II: 10100310-10103061
Chromosome . Primary Identifier  II Chromosome Location . Start  10100310
Chromosome Location . End  10103061 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK945.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014165 puf-12 ZK945.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK945.3 ZK945.3 2301   II: 10100329-10100448

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK945.3.1 10100310 10103061 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65494   139   II: 10100310-10100448 Caenorhabditis elegans
Exon65495   303   II: 10100499-10100801 Caenorhabditis elegans
Exon65496   505   II: 10100849-10101353 Caenorhabditis elegans
Exon65497   260   II: 10101406-10101665 Caenorhabditis elegans
Exon65498   700   II: 10101712-10102411 Caenorhabditis elegans
Exon65499   603   II: 10102459-10103061 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK945.3.1 10100310 10103061 1

1 Sequence

Length
2510

1 Sequence Ontology Term

Identifier Name Description
transcript