WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK945.9.1 Sequence Name  ZK945.9.1
Length (nt)  10034   Chromosome Location  II: 10109100-10121825
Chromosome . Primary Identifier  II Chromosome Location . Start  10109100
Chromosome Location . End  10121825 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK945.9.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003058 lov-1 ZK945.9 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK945.9 ZK945.9 9855   II: 10109279-10109548

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK945.9.1 10109100 10121825 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65522   449   II: 10109100-10109548 Caenorhabditis elegans
Exon65523   244   II: 10109607-10109850 Caenorhabditis elegans
Exon65525   375   II: 10109903-10110277 Caenorhabditis elegans
Exon65526   549   II: 10110321-10110869 Caenorhabditis elegans
Exon65527   296   II: 10110913-10111208 Caenorhabditis elegans
Exon65529   206   II: 10111254-10111459 Caenorhabditis elegans
Exon65530   866   II: 10111507-10112372 Caenorhabditis elegans
Exon65531   993   II: 10112614-10113606 Caenorhabditis elegans
Exon65532   269   II: 10113661-10113929 Caenorhabditis elegans
Exon65533   102   II: 10113976-10114077 Caenorhabditis elegans
Exon65534   228   II: 10114127-10114354 Caenorhabditis elegans
Exon65535   122   II: 10114402-10114523 Caenorhabditis elegans
Exon65536   134   II: 10114577-10114710 Caenorhabditis elegans
Exon65537   200   II: 10114760-10114959 Caenorhabditis elegans
Exon65538   227   II: 10115010-10115236 Caenorhabditis elegans
Exon65539   250   II: 10115284-10115533 Caenorhabditis elegans
Exon65540   294   II: 10115583-10115876 Caenorhabditis elegans
Exon65541   81   II: 10115926-10116006 Caenorhabditis elegans
Exon65542   1013   II: 10116052-10117064 Caenorhabditis elegans
Exon65544   168   II: 10117108-10117275 Caenorhabditis elegans
Exon65545   79   II: 10117835-10117913 Caenorhabditis elegans
Exon65546   578   II: 10117963-10118540 Caenorhabditis elegans
Exon65547   79   II: 10118590-10118668 Caenorhabditis elegans
Exon65548   548   II: 10118714-10119261 Caenorhabditis elegans
Exon65549   79   II: 10119416-10119494 Caenorhabditis elegans
Exon65550   632   II: 10119546-10120177 Caenorhabditis elegans
Exon65551   325   II: 10120406-10120730 Caenorhabditis elegans
Exon65552   140   II: 10120776-10120915 Caenorhabditis elegans
Exon65553   141   II: 10120961-10121101 Caenorhabditis elegans
Exon65554   133   II: 10121363-10121495 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK945.9.1 10109100 10121825 -1

1 Sequence

Length
10034

1 Sequence Ontology Term

Identifier Name Description
transcript