WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F33H1.1b.1 Sequence Name  F33H1.1b.1
Length (nt)  2874   Chromosome Location  II: 10157521-10169345
Chromosome . Primary Identifier  II Chromosome Location . Start  10157521
Chromosome Location . End  10169345 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F33H1.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000914 daf-19 F33H1.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F33H1.1b F33H1.1b 2418   II: 10157953-10158087

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.1b.1 10157521 10169345 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65605   567   II: 10157521-10158087 Caenorhabditis elegans
Exon65610   871   II: 10158138-10159008 Caenorhabditis elegans
Exon65615   213   II: 10159065-10159277 Caenorhabditis elegans
Exon65620   342   II: 10159326-10159667 Caenorhabditis elegans
Exon65625   77   II: 10159745-10159821 Caenorhabditis elegans
Exon65630   132   II: 10160797-10160928 Caenorhabditis elegans
Exon65635   67   II: 10160977-10161043 Caenorhabditis elegans
Exon65642   82   II: 10163497-10163578 Caenorhabditis elegans
Exon65645   75   II: 10164312-10164386 Caenorhabditis elegans
Exon65648   167   II: 10166141-10166307 Caenorhabditis elegans
Exon65650   189   II: 10168074-10168262 Caenorhabditis elegans
Exon65651   92   II: 10169254-10169345 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F33H1.1b.1 10157521 10169345 -1

1 Sequence

Length
2874

1 Sequence Ontology Term

Identifier Name Description
transcript