WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01E8.2.1 Sequence Name  T01E8.2.1
Length (nt)  1392   Chromosome Location  II: 10218471-10220022
Chromosome . Primary Identifier  II Chromosome Location . Start  10218471
Chromosome Location . End  10220022 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01E8.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004334 ref-1 T01E8.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01E8.2 T01E8.2 1104   II: 10218473-10218615

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.2.1 10218471 10220022 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65689   145   II: 10218471-10218615 Caenorhabditis elegans
Exon65690   456   II: 10218670-10219125 Caenorhabditis elegans
Exon65691   163   II: 10219176-10219338 Caenorhabditis elegans
Exon65692   628   II: 10219395-10220022 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.2.1 10218471 10220022 1

1 Sequence

Length
1392

1 Sequence Ontology Term

Identifier Name Description
transcript