WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T01E8.3.1 Sequence Name  T01E8.3.1
Length (nt)  4427   Chromosome Location  II: 10222877-10229440
Chromosome . Primary Identifier  II Chromosome Location . Start  10222877
Chromosome Location . End  10229440 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T01E8.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004038 plc-3 T01E8.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T01E8.3 T01E8.3 4053   II: 10222878-10223173

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.3.1 10222877 10229440 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65730   297   II: 10222877-10223173 Caenorhabditis elegans
Exon65731   185   II: 10223222-10223406 Caenorhabditis elegans
Exon65732   151   II: 10223459-10223609 Caenorhabditis elegans
Exon65733   474   II: 10223656-10224129 Caenorhabditis elegans
Exon65734   86   II: 10224182-10224267 Caenorhabditis elegans
Exon65735   369   II: 10224319-10224687 Caenorhabditis elegans
Exon65736   429   II: 10224763-10225191 Caenorhabditis elegans
Exon65737   699   II: 10225289-10225987 Caenorhabditis elegans
Exon65741   141   II: 10227265-10227405 Caenorhabditis elegans
Exon65742   639   II: 10227696-10228334 Caenorhabditis elegans
Exon65743   293   II: 10228398-10228690 Caenorhabditis elegans
Exon65744   191   II: 10228733-10228923 Caenorhabditis elegans
Exon65745   473   II: 10228968-10229440 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T01E8.3.1 10222877 10229440 1

1 Sequence

Length
4427

1 Sequence Ontology Term

Identifier Name Description
transcript