WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK970.1a.1 Sequence Name  ZK970.1a.1
Length (nt)  3101   Chromosome Location  II: 10283466-10300132
Chromosome . Primary Identifier  II Chromosome Location . Start  10283466
Chromosome Location . End  10300132 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK970.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014171 nep-26 ZK970.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK970.1a ZK970.1a 2316   II: 10284064-10284163

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK970.1a.1 10283466 10300132 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon65829   698   II: 10283466-10284163 Caenorhabditis elegans
Exon65831   155   II: 10284220-10284374 Caenorhabditis elegans
Exon65834   69   II: 10284418-10284486 Caenorhabditis elegans
Exon65837   122   II: 10284535-10284656 Caenorhabditis elegans
Exon65840   68   II: 10285163-10285230 Caenorhabditis elegans
Exon65843   401   II: 10285322-10285722 Caenorhabditis elegans
Exon65846   360   II: 10285768-10286127 Caenorhabditis elegans
Exon65849   69   II: 10286169-10286237 Caenorhabditis elegans
Exon65852   234   II: 10286281-10286514 Caenorhabditis elegans
Exon65855   335   II: 10286558-10286892 Caenorhabditis elegans
Exon65858   204   II: 10286953-10287156 Caenorhabditis elegans
Exon65861   196   II: 10287651-10287846 Caenorhabditis elegans
Exon65867   102   II: 10295692-10295793 Caenorhabditis elegans
Exon65869   88   II: 10300045-10300132 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK970.1a.1 10283466 10300132 -1

1 Sequence

Length
3101

1 Sequence Ontology Term

Identifier Name Description
transcript