WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C07E3.2.1 Sequence Name  C07E3.2.1
Length (nt)  2268   Chromosome Location  II: 10339727-10345112
Chromosome . Primary Identifier  II Chromosome Location . Start  10339727
Chromosome Location . End  10345112 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C07E3.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007413 pro-2 C07E3.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C07E3.2 C07E3.2 2148   II: 10339846-10340058

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C07E3.2.1 10339727 10345112 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66015   332   II: 10339727-10340058 Caenorhabditis elegans
Exon66016   108   II: 10340120-10340227 Caenorhabditis elegans
Exon66017   144   II: 10340282-10340425 Caenorhabditis elegans
Exon66018   228   II: 10340724-10340951 Caenorhabditis elegans
Exon66019   261   II: 10341003-10341263 Caenorhabditis elegans
Exon66020   192   II: 10341965-10342156 Caenorhabditis elegans
Exon66021   111   II: 10342951-10343061 Caenorhabditis elegans
Exon66022   111   II: 10343108-10343218 Caenorhabditis elegans
Exon66023   276   II: 10343278-10343553 Caenorhabditis elegans
Exon66024   283   II: 10344563-10344845 Caenorhabditis elegans
Exon66025   222   II: 10344891-10345112 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C07E3.2.1 10339727 10345112 -1

1 Sequence

Length
2268

1 Sequence Ontology Term

Identifier Name Description
transcript