WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R166.4.1 Sequence Name  R166.4.1
Length (nt)  1712   Chromosome Location  II: 10539438-10541996
Chromosome . Primary Identifier  II Chromosome Location . Start  10539438
Chromosome Location . End  10541996 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R166.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004185 pro-1 R166.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R166.4 R166.4 1590   II: 10539549-10540163

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R166.4.1 10539438 10541996 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66404   726   II: 10539438-10540163 Caenorhabditis elegans
Exon66405   788   II: 10540539-10541326 Caenorhabditis elegans
Exon66406   133   II: 10541376-10541508 Caenorhabditis elegans
Exon66407   65   II: 10541932-10541996 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R166.4.1 10539438 10541996 -1

1 Sequence

Length
1712

1 Sequence Ontology Term

Identifier Name Description
transcript