WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C14A4.12a.1 Sequence Name  C14A4.12a.1
Length (nt)  2276   Chromosome Location  II: 10613076-10618341
Chromosome . Primary Identifier  II Chromosome Location . Start  10613076
Chromosome Location . End  10618341 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C14A4.12a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007562 C14A4.12 C14A4.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C14A4.12a C14A4.12a 1980   II: 10613194-10613297

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C14A4.12a.1 10613076 10618341 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66546   222   II: 10613076-10613297 Caenorhabditis elegans
Exon66547   90   II: 10613342-10613431 Caenorhabditis elegans
Exon66549   157   II: 10613993-10614149 Caenorhabditis elegans
Exon66551   60   II: 10614201-10614260 Caenorhabditis elegans
Exon66552   114   II: 10614380-10614493 Caenorhabditis elegans
Exon66554   284   II: 10615438-10615721 Caenorhabditis elegans
Exon66556   109   II: 10615766-10615874 Caenorhabditis elegans
Exon66558   168   II: 10615929-10616096 Caenorhabditis elegans
Exon66560   229   II: 10616697-10616925 Caenorhabditis elegans
Exon66562   91   II: 10616978-10617068 Caenorhabditis elegans
Exon66564   241   II: 10617224-10617464 Caenorhabditis elegans
Exon66566   169   II: 10617519-10617687 Caenorhabditis elegans
Exon66568   71   II: 10617732-10617802 Caenorhabditis elegans
Exon66570   271   II: 10618071-10618341 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C14A4.12a.1 10613076 10618341 1

1 Sequence

Length
2276

1 Sequence Ontology Term

Identifier Name Description
transcript