WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D2089.4a.1 Sequence Name  D2089.4a.1
Length (nt)  2396   Chromosome Location  II: 10675602-10690282
Chromosome . Primary Identifier  II Chromosome Location . Start  10675602
Chromosome Location . End  10690282 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D2089.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004207 ptb-1 D2089.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D2089.4a D2089.4a 1848   II: 10675658-10675666

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D2089.4a.1 10675602 10690282 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon66663   65   II: 10675602-10675666 Caenorhabditis elegans
Exon66664   285   II: 10677590-10677874 Caenorhabditis elegans
Exon66665   69   II: 10678387-10678455 Caenorhabditis elegans
Exon66666   111   II: 10678758-10678868 Caenorhabditis elegans
Exon66667   72   II: 10678993-10679064 Caenorhabditis elegans
Exon66668   84   II: 10679736-10679819 Caenorhabditis elegans
Exon66671   172   II: 10686756-10686927 Caenorhabditis elegans
Exon66673   222   II: 10687114-10687335 Caenorhabditis elegans
Exon66675   126   II: 10687381-10687506 Caenorhabditis elegans
Exon66677   143   II: 10687898-10688040 Caenorhabditis elegans
Exon66679   34   II: 10688477-10688510 Caenorhabditis elegans
Exon66681   93   II: 10688758-10688850 Caenorhabditis elegans
Exon66683   295   II: 10688918-10689212 Caenorhabditis elegans
Exon66686   625   II: 10689658-10690282 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D2089.4a.1 10675602 10690282 1

1 Sequence

Length
2396

1 Sequence Ontology Term

Identifier Name Description
transcript