WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C52A11.4h Sequence Name  C52A11.4h
Length (nt)  4230   Chromosome Location  II: 10739275-10739358
Chromosome . Primary Identifier  II Chromosome Location . Start  10739275
Chromosome Location . End  10739358
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52A11.4h

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46289 MPZ-1, isoform h 152.4 1409 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00043004
WBRNAi00077321

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C52A11.4h 10739275 10739358 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003404 mpz-1 C52A11.4 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:C52A11.4h 10739275 10739358 -1
CDS:C52A11.4h 10739660 10739806 -1
CDS:C52A11.4h 10739853 10739993 -1
CDS:C52A11.4h 10740130 10740438 -1
CDS:C52A11.4h 10741137 10741220 -1
CDS:C52A11.4h 10741497 10742095 -1
CDS:C52A11.4h 10742488 10742554 -1
CDS:C52A11.4h 10746348 10746440 -1
CDS:C52A11.4h 10746694 10746895 -1
CDS:C52A11.4h 10747055 10747980 -1
CDS:C52A11.4h 10748244 10748477 -1
CDS:C52A11.4h 10748528 10749097 -1
CDS:C52A11.4h 10749856 10749930 -1
CDS:C52A11.4h 10751054 10751173 -1
CDS:C52A11.4h 10751222 10751348 -1
CDS:C52A11.4h 10751463 10751561 -1
CDS:C52A11.4h 10751725 10751831 -1
CDS:C52A11.4h 10752126 10752306 -1
CDS:C52A11.4h 10752356 10752420 -1

1 Sequence

Length
4230

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C52A11.4h.1 C52A11.4h.1 4230   II: 10739275-10752420