WormMine

WS296

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C52A11.4b Sequence Name  C52A11.4b
Length (nt)  2517   Chromosome Location  II: 10757479-10757779
Chromosome . Primary Identifier  II Chromosome Location . Start  10757479
Chromosome Location . End  10757779
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C52A11.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE40803 MPZ-1, isoform b 91.8 838 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00012288
WBRNAi00065442
WBRNAi00065441

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C52A11.4b 10757479 10757779 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003404 mpz-1 C52A11.4 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:C52A11.4b 10757479 10757779 -1
CDS:C52A11.4b 10757953 10758473 -1
CDS:C52A11.4b 10758889 10758980 -1
CDS:C52A11.4b 10759359 10759482 -1
CDS:C52A11.4b 10759604 10759749 -1
CDS:C52A11.4b 10759793 10759944 -1
CDS:C52A11.4b 10760077 10760255 -1
CDS:C52A11.4b 10760413 10760480 -1
CDS:C52A11.4b 10763265 10763355 -1
CDS:C52A11.4b 10763741 10763815 -1
CDS:C52A11.4b 10764131 10764265 -1
CDS:C52A11.4b 10766636 10766736 -1
CDS:C52A11.4b 10767219 10767370 -1
CDS:C52A11.4b 10771059 10771168 -1
CDS:C52A11.4b 10771750 10771829 -1
CDS:C52A11.4b 10771917 10771962 -1
CDS:C52A11.4b 10772296 10772423 -1
CDS:C52A11.4b 10772798 10772813 -1

1 Sequence

Length
2517

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C52A11.4b.1 C52A11.4b.1 2549   II: 10757462-10772828