WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:R06F6.5a Sequence Name  R06F6.5a
Length (nt)  1137   Chromosome Location  II: 10796894-10796965
Chromosome . Primary Identifier  II Chromosome Location . Start  10796894
Chromosome Location . End  10796965
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R06F6.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01621 NPP-19, isoform a 40.4 378 Caenorhabditis elegans
 

Other

16 RNAi

WormBase ID
WBRNAi00078131
WBRNAi00017492
WBRNAi00026048
WBRNAi00001707
WBRNAi00033288
WBRNAi00027431
WBRNAi00078424
WBRNAi00117200
WBRNAi00078128
WBRNAi00078130
WBRNAi00078129
WBRNAi00051397
WBRNAi00117911
WBRNAi00078134
WBRNAi00078133
WBRNAi00078135

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:R06F6.5a 10796894 10796965 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003805 npp-19 R06F6.5 Caenorhabditis elegans

7 Locations


Feature . Primary Identifier
Start End Strand
CDS:R06F6.5a 10796894 10796965 -1
CDS:R06F6.5a 10797018 10797084 -1
CDS:R06F6.5a 10797264 10797448 -1
CDS:R06F6.5a 10797499 10797890 -1
CDS:R06F6.5a 10797941 10798213 -1
CDS:R06F6.5a 10798263 10798336 -1
CDS:R06F6.5a 10798403 10798476 -1

1 Sequence

Length
1137

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:R06F6.5a.1 R06F6.5a.1 1380   II: 10796654-10798479