WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:M106.5 Sequence Name  M106.5
Length (nt)  813   Chromosome Location  II: 10869231-10869233
Chromosome . Primary Identifier  II Chromosome Location . Start  10869231
Chromosome Location . End  10869233
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
M106.5

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE01608 CAP-2 30.8 270 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00009009
WBRNAi00074544
WBRNAi00074546
WBRNAi00074548
WBRNAi00074551
WBRNAi00050941
WBRNAi00072575
WBRNAi00074545
WBRNAi00074547
WBRNAi00074549
WBRNAi00074550
WBRNAi00090794
WBRNAi00091227
WBRNAi00091226
WBRNAi00080559
WBRNAi00072577
WBRNAi00072576
WBRNAi00030276
WBRNAi00114596
WBRNAi00108543
WBRNAi00108618
WBRNAi00063435
WBRNAi00110963
WBRNAi00108749
WBRNAi00108739

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:M106.5 10869231 10869233 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000293 cap-2 M106.5 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:M106.5 10869231 10869233 1
CDS:M106.5 10869282 10869399 1
CDS:M106.5 10869449 10869542 1
CDS:M106.5 10869591 10869704 1
CDS:M106.5 10869757 10869907 1
CDS:M106.5 10869960 10870064 1
CDS:M106.5 10870110 10870235 1
CDS:M106.5 10870314 10870415 1

1 Sequence

Length
813

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:M106.5.1 M106.5.1 1260   II: 10869196-10870827