WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59E10.3.1 Sequence Name  F59E10.3.1
Length (nt)  693   Chromosome Location  II: 10872879-10873796
Chromosome . Primary Identifier  II Chromosome Location . Start  10872879
Chromosome Location . End  10873796 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59E10.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010333 copz-1 F59E10.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59E10.3 F59E10.3 555   II: 10872912-10872929

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59E10.3.1 10872879 10873796 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67356   51   II: 10872879-10872929 Caenorhabditis elegans
Exon67357   72   II: 10872993-10873064 Caenorhabditis elegans
Exon67358   88   II: 10873123-10873210 Caenorhabditis elegans
Exon67359   226   II: 10873261-10873486 Caenorhabditis elegans
Exon67360   256   II: 10873541-10873796 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59E10.3.1 10872879 10873796 1

1 Sequence

Length
693

1 Sequence Ontology Term

Identifier Name Description
transcript