WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E10.1c.1 Sequence Name  F45E10.1c.1
Length (nt)  5200   Chromosome Location  II: 11058097-11089415
Chromosome . Primary Identifier  II Chromosome Location . Start  11058097
Chromosome Location . End  11089415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E10.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006788 unc-53 F45E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E10.1c F45E10.1c 4965   II: 11058332-11058555

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1c.1 11058097 11089415 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

23 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67928   459   II: 11058097-11058555 Caenorhabditis elegans
Exon67935   1462   II: 11058603-11060064 Caenorhabditis elegans
Exon67944   138   II: 11060263-11060400 Caenorhabditis elegans
Exon67952   333   II: 11060454-11060786 Caenorhabditis elegans
Exon67960   83   II: 11061065-11061147 Caenorhabditis elegans
Exon67966   213   II: 11061249-11061461 Caenorhabditis elegans
Exon67972   123   II: 11061613-11061735 Caenorhabditis elegans
Exon67978   335   II: 11061842-11062176 Caenorhabditis elegans
Exon67987   84   II: 11063411-11063494 Caenorhabditis elegans
Exon67995   112   II: 11066718-11066829 Caenorhabditis elegans
Exon68003   126   II: 11067401-11067526 Caenorhabditis elegans
Exon68011   186   II: 11067577-11067762 Caenorhabditis elegans
Exon68019   136   II: 11068536-11068671 Caenorhabditis elegans
Exon68027   129   II: 11069048-11069176 Caenorhabditis elegans
Exon68036   168   II: 11069657-11069824 Caenorhabditis elegans
Exon68044   413   II: 11070715-11071127 Caenorhabditis elegans
Exon68050   159   II: 11071173-11071331 Caenorhabditis elegans
Exon68057   119   II: 11073410-11073528 Caenorhabditis elegans
Exon68063   142   II: 11073740-11073881 Caenorhabditis elegans
Exon68070   73   II: 11078719-11078791 Caenorhabditis elegans
Exon68076   59   II: 11080482-11080540 Caenorhabditis elegans
Exon68082   118   II: 11083842-11083959 Caenorhabditis elegans
Exon68087   30   II: 11089386-11089415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1c.1 11058097 11089415 -1

1 Sequence

Length
5200

1 Sequence Ontology Term

Identifier Name Description
transcript