WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E10.1f.1 Sequence Name  F45E10.1f.1
Length (nt)  4041   Chromosome Location  II: 11058332-11070903
Chromosome . Primary Identifier  II Chromosome Location . Start  11058332
Chromosome Location . End  11070903 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E10.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006788 unc-53 F45E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E10.1f F45E10.1f 4041   II: 11058332-11058555

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1f.1 11058332 11070903 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67893   224   II: 11058332-11058555 Caenorhabditis elegans
Exon67901   1462   II: 11058603-11060064 Caenorhabditis elegans
Exon67910   138   II: 11060263-11060400 Caenorhabditis elegans
Exon67918   333   II: 11060454-11060786 Caenorhabditis elegans
Exon67926   83   II: 11061065-11061147 Caenorhabditis elegans
Exon67932   213   II: 11061249-11061461 Caenorhabditis elegans
Exon67938   123   II: 11061613-11061735 Caenorhabditis elegans
Exon67944   335   II: 11061842-11062176 Caenorhabditis elegans
Exon67953   84   II: 11063411-11063494 Caenorhabditis elegans
Exon67961   112   II: 11066718-11066829 Caenorhabditis elegans
Exon67969   126   II: 11067401-11067526 Caenorhabditis elegans
Exon67977   186   II: 11067577-11067762 Caenorhabditis elegans
Exon67985   136   II: 11068536-11068671 Caenorhabditis elegans
Exon67993   129   II: 11069048-11069176 Caenorhabditis elegans
Exon68001   168   II: 11069657-11069824 Caenorhabditis elegans
Exon68004   189   II: 11070715-11070903 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1f.1 11058332 11070903 -1

1 Sequence

Length
4041

1 Sequence Ontology Term

Identifier Name Description
transcript