WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45E10.1g.1 Sequence Name  F45E10.1g.1
Length (nt)  4842   Chromosome Location  II: 11058332-11089415
Chromosome . Primary Identifier  II Chromosome Location . Start  11058332
Chromosome Location . End  11089415 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45E10.1g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006788 unc-53 F45E10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45E10.1g F45E10.1g 4842   II: 11058332-11058555

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1g.1 11058332 11089415 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

22 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon67932   224   II: 11058332-11058555 Caenorhabditis elegans
Exon67939   1462   II: 11058603-11060064 Caenorhabditis elegans
Exon67948   138   II: 11060263-11060400 Caenorhabditis elegans
Exon67956   333   II: 11060454-11060786 Caenorhabditis elegans
Exon67964   83   II: 11061065-11061147 Caenorhabditis elegans
Exon67970   213   II: 11061249-11061461 Caenorhabditis elegans
Exon67982   335   II: 11061842-11062176 Caenorhabditis elegans
Exon67991   84   II: 11063411-11063494 Caenorhabditis elegans
Exon67999   112   II: 11066718-11066829 Caenorhabditis elegans
Exon68007   126   II: 11067401-11067526 Caenorhabditis elegans
Exon68015   186   II: 11067577-11067762 Caenorhabditis elegans
Exon68023   136   II: 11068536-11068671 Caenorhabditis elegans
Exon68031   129   II: 11069048-11069176 Caenorhabditis elegans
Exon68039   168   II: 11069657-11069824 Caenorhabditis elegans
Exon68046   413   II: 11070715-11071127 Caenorhabditis elegans
Exon68052   159   II: 11071173-11071331 Caenorhabditis elegans
Exon68059   119   II: 11073410-11073528 Caenorhabditis elegans
Exon68065   142   II: 11073740-11073881 Caenorhabditis elegans
Exon68071   73   II: 11078719-11078791 Caenorhabditis elegans
Exon68077   59   II: 11080482-11080540 Caenorhabditis elegans
Exon68083   118   II: 11083842-11083959 Caenorhabditis elegans
Exon68088   30   II: 11089386-11089415 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45E10.1g.1 11058332 11089415 -1

1 Sequence

Length
4842

1 Sequence Ontology Term

Identifier Name Description
transcript