WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:C09H10.10a Sequence Name  C09H10.10a
Length (nt)  1089   Chromosome Location  II: 11095152-11095506
Chromosome . Primary Identifier  II Chromosome Location . Start  11095152
Chromosome Location . End  11095506
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09H10.10a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44319 NBS-1, isoform a 40.2 362 Caenorhabditis elegans
 

Other

31 RNAi

WormBase ID
WBRNAi00096304
WBRNAi00096306
WBRNAi00095490
WBRNAi00096668
WBRNAi00096671
WBRNAi00096674
WBRNAi00096677
WBRNAi00096680
WBRNAi00096708
WBRNAi00096711
WBRNAi00096714
WBRNAi00096796
WBRNAi00094330
WBRNAi00040252
WBRNAi00066858
WBRNAi00094071
WBRNAi00024515
WBRNAi00064932
WBRNAi00028749
WBRNAi00114616
WBRNAi00094446
WBRNAi00095887
WBRNAi00095964
WBRNAi00096039
WBRNAi00096116
WBRNAi00096193
WBRNAi00096270
WBRNAi00096365
WBRNAi00096448
WBRNAi00096531

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:C09H10.10a 11095152 11095506 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007504 nbs-1 C09H10.10 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:C09H10.10a 11095152 11095506 -1
CDS:C09H10.10a 11095551 11095773 -1
CDS:C09H10.10a 11095825 11095886 -1
CDS:C09H10.10a 11095936 11096210 -1
CDS:C09H10.10a 11096257 11096387 -1
CDS:C09H10.10a 11096433 11096475 -1

1 Sequence

Length
1089

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:C09H10.10a.1 C09H10.10a.1 1193   II: 11095048-11096475