WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W10C6.1 Sequence Name  W10C6.1
Length (nt)  5448   Chromosome Location  II: 11108224-11108277
Chromosome . Primary Identifier  II Chromosome Location . Start  11108224
Chromosome Location . End  11108277
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10C6.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54528 APC-1 205.1 1815 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00024517
WBRNAi00085633
WBRNAi00085822
WBRNAi00007205
WBRNAi00019770
WBRNAi00071788
WBRNAi00055078
WBRNAi00040259
WBRNAi00071223
WBRNAi00065694
WBRNAi00008380
WBRNAi00028754
WBRNAi00040258

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W10C6.1 11108224 11108277 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003133 apc-1 W10C6.1 Caenorhabditis elegans

15 Locations


Feature . Primary Identifier
Start End Strand
CDS:W10C6.1 11108224 11108277 1
CDS:W10C6.1 11108331 11108660 1
CDS:W10C6.1 11108705 11109134 1
CDS:W10C6.1 11109420 11109566 1
CDS:W10C6.1 11112750 11112837 1
CDS:W10C6.1 11113321 11113912 1
CDS:W10C6.1 11114511 11114974 1
CDS:W10C6.1 11115569 11116396 1
CDS:W10C6.1 11117108 11117963 1
CDS:W10C6.1 11118372 11118974 1
CDS:W10C6.1 11119025 11119156 1
CDS:W10C6.1 11119641 11119885 1
CDS:W10C6.1 11119937 11120054 1
CDS:W10C6.1 11120106 11120593 1
CDS:W10C6.1 11120642 11120714 1

1 Sequence

Length
5448

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W10C6.1.1 W10C6.1.1 5602   II: 11108161-11120805