WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:K07C10.1.1 Sequence Name  K07C10.1.1
Length (nt)  3408   Chromosome Location  II: 11156589-11162481
Chromosome . Primary Identifier  II Chromosome Location . Start  11156589
Chromosome Location . End  11162481 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
K07C10.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004227 ptr-13 K07C10.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:K07C10.1 K07C10.1 2556   II: 11157291-11157521

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:K07C10.1.1 11156589 11162481 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68323   933   II: 11156589-11157521 Caenorhabditis elegans
Exon68324   200   II: 11157568-11157767 Caenorhabditis elegans
Exon68327   121   II: 11157991-11158111 Caenorhabditis elegans
Exon68328   178   II: 11158163-11158340 Caenorhabditis elegans
Exon68329   257   II: 11158639-11158895 Caenorhabditis elegans
Exon68330   984   II: 11159091-11160074 Caenorhabditis elegans
Exon68331   123   II: 11160460-11160582 Caenorhabditis elegans
Exon68332   228   II: 11160680-11160907 Caenorhabditis elegans
Exon68335   88   II: 11161762-11161849 Caenorhabditis elegans
Exon68336   296   II: 11162186-11162481 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:K07C10.1.1 11156589 11162481 -1

1 Sequence

Length
3408

1 Sequence Ontology Term

Identifier Name Description
transcript