WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T24F1.6a.1 Sequence Name  T24F1.6a.1
Length (nt)  3390   Chromosome Location  II: 11323051-11329429
Chromosome . Primary Identifier  II Chromosome Location . Start  11323051
Chromosome Location . End  11329429 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24F1.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007041 tag-180 T24F1.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T24F1.6a T24F1.6a 3204   II: 11323182-11323280

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T24F1.6a.1 11323051 11329429 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

19 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68839   230   II: 11323051-11323280 Caenorhabditis elegans
Exon68840   77   II: 11323330-11323406 Caenorhabditis elegans
Exon68842   110   II: 11323664-11323773 Caenorhabditis elegans
Exon68844   315   II: 11323820-11324134 Caenorhabditis elegans
Exon68846   128   II: 11324184-11324311 Caenorhabditis elegans
Exon68848   238   II: 11324363-11324600 Caenorhabditis elegans
Exon68850   115   II: 11324648-11324762 Caenorhabditis elegans
Exon68852   316   II: 11324822-11325137 Caenorhabditis elegans
Exon68854   87   II: 11325194-11325280 Caenorhabditis elegans
Exon68856   156   II: 11325364-11325519 Caenorhabditis elegans
Exon68858   119   II: 11325570-11325688 Caenorhabditis elegans
Exon68860   228   II: 11325753-11325980 Caenorhabditis elegans
Exon68862   229   II: 11326033-11326261 Caenorhabditis elegans
Exon68864   265   II: 11326673-11326937 Caenorhabditis elegans
Exon68866   118   II: 11327086-11327203 Caenorhabditis elegans
Exon68868   337   II: 11327393-11327729 Caenorhabditis elegans
Exon68870   117   II: 11328395-11328511 Caenorhabditis elegans
Exon68872   121   II: 11328730-11328850 Caenorhabditis elegans
Exon68875   84   II: 11329346-11329429 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T24F1.6a.1 11323051 11329429 -1

1 Sequence

Length
3390

1 Sequence Ontology Term

Identifier Name Description
transcript