WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T24F1.6a Sequence Name  T24F1.6a
Length (nt)  3204   Chromosome Location  II: 11323182-11323280
Chromosome . Primary Identifier  II Chromosome Location . Start  11323182
Chromosome Location . End  11323280
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T24F1.6a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE36207 TAG-180, isoform a 123.2 1067 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001793
WBRNAi00054077
WBRNAi00019172

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T24F1.6a 11323182 11323280 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007041 tag-180 T24F1.6 Caenorhabditis elegans

19 Locations


Feature . Primary Identifier
Start End Strand
CDS:T24F1.6a 11323182 11323280 -1
CDS:T24F1.6a 11323330 11323406 -1
CDS:T24F1.6a 11323664 11323773 -1
CDS:T24F1.6a 11323820 11324134 -1
CDS:T24F1.6a 11324184 11324311 -1
CDS:T24F1.6a 11324363 11324600 -1
CDS:T24F1.6a 11324648 11324762 -1
CDS:T24F1.6a 11324822 11325137 -1
CDS:T24F1.6a 11325194 11325280 -1
CDS:T24F1.6a 11325364 11325519 -1
CDS:T24F1.6a 11325570 11325688 -1
CDS:T24F1.6a 11325753 11325980 -1
CDS:T24F1.6a 11326033 11326261 -1
CDS:T24F1.6a 11326673 11326937 -1
CDS:T24F1.6a 11327086 11327203 -1
CDS:T24F1.6a 11327393 11327729 -1
CDS:T24F1.6a 11328395 11328511 -1
CDS:T24F1.6a 11328730 11328850 -1
CDS:T24F1.6a 11329346 11329374 -1

1 Sequence

Length
3204

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T24F1.6a.1 T24F1.6a.1 3390   II: 11323051-11329429