WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0491.8b.1 Sequence Name  B0491.8b.1
Length (nt)  3017   Chromosome Location  II: 11358424-11370316
Chromosome . Primary Identifier  II Chromosome Location . Start  11358424
Chromosome Location . End  11370316 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0491.8b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000529 clh-2 B0491.8 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0491.8b B0491.8b 2628   II: 11358447-11358535

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0491.8b.1 11358424 11370316 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

16 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon68974   112   II: 11358424-11358535 Caenorhabditis elegans
Exon68976   122   II: 11365392-11365513 Caenorhabditis elegans
Exon68979   120   II: 11365883-11366002 Caenorhabditis elegans
Exon68982   132   II: 11366052-11366183 Caenorhabditis elegans
Exon68985   134   II: 11366592-11366725 Caenorhabditis elegans
Exon68988   91   II: 11366935-11367025 Caenorhabditis elegans
Exon68991   72   II: 11367243-11367314 Caenorhabditis elegans
Exon68994   316   II: 11367359-11367674 Caenorhabditis elegans
Exon68997   244   II: 11367721-11367964 Caenorhabditis elegans
Exon69000   91   II: 11368009-11368099 Caenorhabditis elegans
Exon69003   185   II: 11368153-11368337 Caenorhabditis elegans
Exon69006   253   II: 11368386-11368638 Caenorhabditis elegans
Exon69009   148   II: 11368684-11368831 Caenorhabditis elegans
Exon69012   226   II: 11368888-11369113 Caenorhabditis elegans
Exon69015   189   II: 11369163-11369351 Caenorhabditis elegans
Exon69018   582   II: 11369735-11370316 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0491.8b.1 11358424 11370316 1

1 Sequence

Length
3017

1 Sequence Ontology Term

Identifier Name Description
transcript