WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:B0334.11a.1 Sequence Name  B0334.11a.1
Length (nt)  1659   Chromosome Location  II: 11493159-11495321
Chromosome . Primary Identifier  II Chromosome Location . Start  11493159
Chromosome Location . End  11495321 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
B0334.11a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003868 ooc-3 B0334.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:B0334.11a B0334.11a 1347   II: 11493464-11493513

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:B0334.11a.1 11493159 11495321 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69418   355   II: 11493159-11493513 Caenorhabditis elegans
Exon69420   203   II: 11493706-11493908 Caenorhabditis elegans
Exon69422   133   II: 11493965-11494097 Caenorhabditis elegans
Exon69424   107   II: 11494148-11494254 Caenorhabditis elegans
Exon69426   119   II: 11494303-11494421 Caenorhabditis elegans
Exon69428   463   II: 11494484-11494946 Caenorhabditis elegans
Exon69431   98   II: 11494997-11495094 Caenorhabditis elegans
Exon69433   181   II: 11495141-11495321 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:B0334.11a.1 11493159 11495321 -1

1 Sequence

Length
1659

1 Sequence Ontology Term

Identifier Name Description
transcript