WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y62F5A.1b Sequence Name  Y62F5A.1b
Length (nt)  894   Chromosome Location  II: 11527357-11527370
Chromosome . Primary Identifier  II Chromosome Location . Start  11527357
Chromosome Location . End  11527370
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y62F5A.1b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE24545 MDT-8, isoform b 33.4 297 Caenorhabditis elegans
 

Other

18 RNAi

WormBase ID
WBRNAi00075066
WBRNAi00057857
WBRNAi00112425
WBRNAi00072772
WBRNAi00087233
WBRNAi00037679
WBRNAi00075067
WBRNAi00075068
WBRNAi00075070
WBRNAi00075063
WBRNAi00075065
WBRNAi00075064
WBRNAi00075069
WBRNAi00072773
WBRNAi00026890
WBRNAi00112416
WBRNAi00085239
WBRNAi00117663

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y62F5A.1b 11527357 11527370 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007013 mdt-8 Y62F5A.1 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y62F5A.1b 11527357 11527370 -1
CDS:Y62F5A.1b 11531444 11531759 -1
CDS:Y62F5A.1b 11533200 11533433 -1
CDS:Y62F5A.1b 11533485 11533814 -1

1 Sequence

Length
894

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y62F5A.1b.1 Y62F5A.1b.1 1079   II: 11527172-11533814