WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F54D5.12 Sequence Name  F54D5.12
Length (nt)  1464   Chromosome Location  II: 11538976-11539162
Chromosome . Primary Identifier  II Chromosome Location . Start  11538976
Chromosome Location . End  11539162
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F54D5.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE26814 DHGD-1 53.3 487 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00048309
WBRNAi00015616
WBRNAi00021225
WBRNAi00032788
WBRNAi00094880

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F54D5.12 11538976 11539162 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010055 dhgd-1 F54D5.12 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F54D5.12 11538976 11539162 -1
CDS:F54D5.12 11539225 11539741 -1
CDS:F54D5.12 11539798 11540364 -1
CDS:F54D5.12 11540438 11540630 -1

1 Sequence

Length
1464

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F54D5.12.2 F54D5.12.2 1666   II: 11538895-11552081
Transcript:F54D5.12.1 F54D5.12.1 1536   II: 11538904-11540630