WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:D1043.1.1 Sequence Name  D1043.1.1
Length (nt)  2835   Chromosome Location  II: 11582849-11588490
Chromosome . Primary Identifier  II Chromosome Location . Start  11582849
Chromosome Location . End  11588490 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
D1043.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008361 ints-7 D1043.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:D1043.1 D1043.1 2733   II: 11582850-11583013

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:D1043.1.1 11582849 11588490 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69657   165   II: 11582849-11583013 Caenorhabditis elegans
Exon69658   532   II: 11583319-11583850 Caenorhabditis elegans
Exon69659   138   II: 11584088-11584225 Caenorhabditis elegans
Exon69660   324   II: 11584992-11585315 Caenorhabditis elegans
Exon69661   738   II: 11585367-11586104 Caenorhabditis elegans
Exon69662   173   II: 11586781-11586953 Caenorhabditis elegans
Exon69663   121   II: 11587005-11587125 Caenorhabditis elegans
Exon69664   99   II: 11587174-11587272 Caenorhabditis elegans
Exon69665   159   II: 11587856-11588014 Caenorhabditis elegans
Exon69666   81   II: 11588062-11588142 Caenorhabditis elegans
Exon69667   305   II: 11588186-11588490 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:D1043.1.1 11582849 11588490 1

1 Sequence

Length
2835

1 Sequence Ontology Term

Identifier Name Description
transcript