WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F07A11.6b.1 Sequence Name  F07A11.6b.1
Length (nt)  7224   Chromosome Location  II: 11615242-11633586
Chromosome . Primary Identifier  II Chromosome Location . Start  11615242
Chromosome Location . End  11633586 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F07A11.6b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008549 din-1 F07A11.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F07A11.6b F07A11.6b 7224   II: 11615242-11615346

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.6b.1 11615242 11633586 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon69755   105   II: 11615242-11615346 Caenorhabditis elegans
Exon69758   105   II: 11615796-11615900 Caenorhabditis elegans
Exon69765   170   II: 11615953-11616122 Caenorhabditis elegans
Exon69773   190   II: 11616939-11617128 Caenorhabditis elegans
Exon69783   180   II: 11621132-11621311 Caenorhabditis elegans
Exon69788   1077   II: 11622548-11623624 Caenorhabditis elegans
Exon69793   108   II: 11623689-11623796 Caenorhabditis elegans
Exon69797   588   II: 11623936-11624523 Caenorhabditis elegans
Exon69802   645   II: 11624629-11625273 Caenorhabditis elegans
Exon69807   1548   II: 11625321-11626868 Caenorhabditis elegans
Exon69812   210   II: 11627018-11627227 Caenorhabditis elegans
Exon69817   478   II: 11627730-11628207 Caenorhabditis elegans
Exon69822   154   II: 11628264-11628417 Caenorhabditis elegans
Exon69827   191   II: 11628466-11628656 Caenorhabditis elegans
Exon69832   246   II: 11629169-11629414 Caenorhabditis elegans
Exon69838   215   II: 11630588-11630802 Caenorhabditis elegans
Exon69842   271   II: 11631657-11631927 Caenorhabditis elegans
Exon69846   270   II: 11632004-11632273 Caenorhabditis elegans
Exon69851   198   II: 11633017-11633214 Caenorhabditis elegans
Exon69854   168   II: 11633264-11633431 Caenorhabditis elegans
Exon69856   107   II: 11633480-11633586 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F07A11.6b.1 11615242 11633586 -1

1 Sequence

Length
7224

1 Sequence Ontology Term

Identifier Name Description
transcript