WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D12.7b.3 Sequence Name  F13D12.7b.3
Length (nt)  2061   Chromosome Location  II: 11742885-11746144
Chromosome . Primary Identifier  II Chromosome Location . Start  11742885
Chromosome Location . End  11746144 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D12.7b.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001679 gpb-1 F13D12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D12.7b F13D12.7b 462   II: 11743979-11744085

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13D12.7b.3 11742885 11746144 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70071   1201   II: 11742885-11744085 Caenorhabditis elegans
Exon70076   217   II: 11744163-11744379 Caenorhabditis elegans
Exon70082   72   II: 11744431-11744502 Caenorhabditis elegans
Exon70088   130   II: 11744553-11744682 Caenorhabditis elegans
Exon70094   151   II: 11745420-11745570 Caenorhabditis elegans
Exon70099   79   II: 11745720-11745798 Caenorhabditis elegans
Exon70103   96   II: 11745886-11745981 Caenorhabditis elegans
Exon70107   115   II: 11746030-11746144 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13D12.7b.3 11742885 11746144 -1

1 Sequence

Length
2061

1 Sequence Ontology Term

Identifier Name Description
transcript