WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F13D12.7b Sequence Name  F13D12.7b
Length (nt)  462   Chromosome Location  II: 11743979-11744085
Chromosome . Primary Identifier  II Chromosome Location . Start  11743979
Chromosome Location . End  11744085
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D12.7b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE44352 GPB-1, isoform b 16.7 153 Caenorhabditis elegans
 

Other

25 RNAi

WormBase ID
WBRNAi00095568
WBRNAi00063513
WBRNAi00063514
WBRNAi00065900
WBRNAi00065899
WBRNAi00025091
WBRNAi00008648
WBRNAi00080562
WBRNAi00004986
WBRNAi00077256
WBRNAi00077264
WBRNAi00077278
WBRNAi00111994
WBRNAi00044504
WBRNAi00082031
WBRNAi00083417
WBRNAi00083393
WBRNAi00078843
WBRNAi00096842
WBRNAi00084159
WBRNAi00085355
WBRNAi00086486
WBRNAi00083410
WBRNAi00087204
WBRNAi00083376

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F13D12.7b 11743979 11744085 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001679 gpb-1 F13D12.7 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:F13D12.7b 11743979 11744085 -1
CDS:F13D12.7b 11744163 11744379 -1
CDS:F13D12.7b 11744431 11744502 -1
CDS:F13D12.7b 11744553 11744618 -1

1 Sequence

Length
462

1 Sequence Ontology Term

Identifier Name Description
CDS  

5 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F13D12.7b.1 F13D12.7b.1 2448   II: 11742811-11748611
Transcript:F13D12.7b.2 F13D12.7b.2 2360   II: 11742813-11747818
Transcript:F13D12.7b.4 F13D12.7b.4 1844   II: 11742814-11745572
Transcript:F13D12.7b.3 F13D12.7b.3 2061   II: 11742885-11746144
Transcript:F13D12.7b.5 F13D12.7b.5 1591   II: 11742915-11744683