WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D12.7b.5 Sequence Name  F13D12.7b.5
Length (nt)  1591   Chromosome Location  II: 11742915-11744683
Chromosome . Primary Identifier  II Chromosome Location . Start  11742915
Chromosome Location . End  11744683 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D12.7b.5

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001679 gpb-1 F13D12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D12.7b F13D12.7b 462   II: 11743979-11744085

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13D12.7b.5 11742915 11744683 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70072   1171   II: 11742915-11744085 Caenorhabditis elegans
Exon70078   217   II: 11744163-11744379 Caenorhabditis elegans
Exon70084   72   II: 11744431-11744502 Caenorhabditis elegans
Exon70090   131   II: 11744553-11744683 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13D12.7b.5 11742915 11744683 -1

1 Sequence

Length
1591

1 Sequence Ontology Term

Identifier Name Description
transcript