WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F13D12.7b.1 Sequence Name  F13D12.7b.1
Length (nt)  2448   Chromosome Location  II: 11742811-11748611
Chromosome . Primary Identifier  II Chromosome Location . Start  11742811
Chromosome Location . End  11748611 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F13D12.7b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001679 gpb-1 F13D12.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F13D12.7b F13D12.7b 462   II: 11743979-11744085

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F13D12.7b.1 11742811 11748611 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70105   1275   II: 11742811-11744085 Caenorhabditis elegans
Exon70111   217   II: 11744163-11744379 Caenorhabditis elegans
Exon70117   72   II: 11744431-11744502 Caenorhabditis elegans
Exon70123   130   II: 11744553-11744682 Caenorhabditis elegans
Exon70129   151   II: 11745420-11745570 Caenorhabditis elegans
Exon70134   79   II: 11745720-11745798 Caenorhabditis elegans
Exon70138   96   II: 11745886-11745981 Caenorhabditis elegans
Exon70142   114   II: 11746030-11746143 Caenorhabditis elegans
Exon70147   221   II: 11747591-11747811 Caenorhabditis elegans
Exon70149   93   II: 11748519-11748611 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F13D12.7b.1 11742811 11748611 -1

1 Sequence

Length
2448

1 Sequence Ontology Term

Identifier Name Description
transcript