WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:T27D12.2c Sequence Name  T27D12.2c
Length (nt)  2922   Chromosome Location  II: 11846859-11846974
Chromosome . Primary Identifier  II Chromosome Location . Start  11846859
Chromosome Location . End  11846974
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T27D12.2c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE54385 CLH-1, isoform c 108.9 973 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00054307
WBRNAi00019329
WBRNAi00077546

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:T27D12.2c 11846859 11846974 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000528 clh-1 T27D12.2 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:T27D12.2c 11846859 11846974 -1
CDS:T27D12.2c 11847031 11847214 -1
CDS:T27D12.2c 11847278 11847385 -1
CDS:T27D12.2c 11847429 11847491 -1
CDS:T27D12.2c 11847722 11847848 -1
CDS:T27D12.2c 11847982 11848026 -1
CDS:T27D12.2c 11848423 11848659 -1
CDS:T27D12.2c 11848714 11849352 -1
CDS:T27D12.2c 11849863 11849964 -1
CDS:T27D12.2c 11850107 11850323 -1
CDS:T27D12.2c 11850367 11850529 -1
CDS:T27D12.2c 11850636 11850769 -1
CDS:T27D12.2c 11850820 11850951 -1
CDS:T27D12.2c 11850998 11851117 -1
CDS:T27D12.2c 11851163 11851311 -1
CDS:T27D12.2c 11854514 11854570 -1
CDS:T27D12.2c 11854615 11854743 -1
CDS:T27D12.2c 11856262 11856461 -1

1 Sequence

Length
2922

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:T27D12.2c.1 T27D12.2c.1 2922   II: 11846859-11856461