WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK930.1a.1 Sequence Name  ZK930.1a.1
Length (nt)  4236   Chromosome Location  II: 11908725-11915852
Chromosome . Primary Identifier  II Chromosome Location . Start  11908725
Chromosome Location . End  11915852 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK930.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00014151 vps-15 ZK930.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK930.1a ZK930.1a 4065   II: 11908889-11908990

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK930.1a.1 11908725 11915852 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70469   266   II: 11908725-11908990 Caenorhabditis elegans
Exon70471   306   II: 11909041-11909346 Caenorhabditis elegans
Exon70473   739   II: 11909397-11910135 Caenorhabditis elegans
Exon70476   235   II: 11910188-11910422 Caenorhabditis elegans
Exon70477   245   II: 11910892-11911136 Caenorhabditis elegans
Exon70478   202   II: 11911188-11911389 Caenorhabditis elegans
Exon70479   250   II: 11911437-11911686 Caenorhabditis elegans
Exon70480   272   II: 11911739-11912010 Caenorhabditis elegans
Exon70481   310   II: 11912419-11912728 Caenorhabditis elegans
Exon70482   213   II: 11913221-11913433 Caenorhabditis elegans
Exon70483   391   II: 11913488-11913878 Caenorhabditis elegans
Exon70484   426   II: 11913945-11914370 Caenorhabditis elegans
Exon70489   279   II: 11915425-11915703 Caenorhabditis elegans
Exon70490   102   II: 11915751-11915852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK930.1a.1 11908725 11915852 -1

1 Sequence

Length
4236

1 Sequence Ontology Term

Identifier Name Description
transcript