WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.6a.1 Sequence Name  Y17G7B.6a.1
Length (nt)  1296   Chromosome Location  II: 12009072-12023829
Chromosome . Primary Identifier  II Chromosome Location . Start  12009072
Chromosome Location . End  12023829 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.6a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012461 glb-29 Y17G7B.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.6a Y17G7B.6a 1107   II: 12009099-12009145

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.6a.1 12009072 12023829 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70808   74   II: 12009072-12009145 Caenorhabditis elegans
Exon70809   139   II: 12012362-12012500 Caenorhabditis elegans
Exon70811   78   II: 12013168-12013245 Caenorhabditis elegans
Exon70812   125   II: 12013784-12013908 Caenorhabditis elegans
Exon70815   102   II: 12016268-12016369 Caenorhabditis elegans
Exon70818   106   II: 12022077-12022182 Caenorhabditis elegans
Exon70822   92   II: 12022520-12022611 Caenorhabditis elegans
Exon70826   187   II: 12022708-12022894 Caenorhabditis elegans
Exon70830   150   II: 12023387-12023536 Caenorhabditis elegans
Exon70835   243   II: 12023587-12023829 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.6a.1 12009072 12023829 1

1 Sequence

Length
1296

1 Sequence Ontology Term

Identifier Name Description
transcript