WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y17G7B.18a.1 Sequence Name  Y17G7B.18a.1
Length (nt)  1839   Chromosome Location  II: 12103332-12107857
Chromosome . Primary Identifier  II Chromosome Location . Start  12103332
Chromosome Location . End  12107857 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y17G7B.18a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012469 Y17G7B.18 Y17G7B.18 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y17G7B.18a Y17G7B.18a 1137   II: 12104024-12104286

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.18a.1 12103332 12107857 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon70987   955   II: 12103332-12104286 Caenorhabditis elegans
Exon70988   271   II: 12105389-12105659 Caenorhabditis elegans
Exon70990   137   II: 12106884-12107020 Caenorhabditis elegans
Exon70992   232   II: 12107295-12107526 Caenorhabditis elegans
Exon70994   244   II: 12107614-12107857 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y17G7B.18a.1 12103332 12107857 -1

1 Sequence

Length
1839

1 Sequence Ontology Term

Identifier Name Description
transcript