WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W05H5.1.1 Sequence Name  W05H5.1.1
Length (nt)  963   Chromosome Location  II: 12443119-12444779
Chromosome . Primary Identifier  II Chromosome Location . Start  12443119
Chromosome Location . End  12444779 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W05H5.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012283 W05H5.1 W05H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W05H5.1 W05H5.1 963   II: 12443119-12443267

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W05H5.1.1 12443119 12444779 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon71606   149   II: 12443119-12443267 Caenorhabditis elegans
Exon71607   172   II: 12443315-12443486 Caenorhabditis elegans
Exon71608   114   II: 12443892-12444005 Caenorhabditis elegans
Exon71609   201   II: 12444056-12444256 Caenorhabditis elegans
Exon71610   152   II: 12444348-12444499 Caenorhabditis elegans
Exon71611   77   II: 12444547-12444623 Caenorhabditis elegans
Exon71612   98   II: 12444682-12444779 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W05H5.1.1 12443119 12444779 -1

1 Sequence

Length
963

1 Sequence Ontology Term

Identifier Name Description
transcript