WormMine: Gene WBGene00005287

• WormBase Gene ID: WBGene00005287
• Gene Name: srh-66
• Sequence Name: T21B4.10
• Organism: Caenorhabditis elegans
• Automated Description: Is affected by tatn-1 and clk-1 based on RNA-seq and microarray studies.
• Biotype: SO:0000336
• Genetic Position: II :10.1753 ±0.002641
• Length (nt): 1133

1 Organism

• Name: Caenorhabditis elegans
• Taxon Id: 6239

1 Synonyms

• Value: WBGene00005287

Genomics

0 Transcripts

Other

0 CDSs

0 RNAi Result

33 Allele

• gk963801
• gk963053
• gk962684
• gk964116
• tm11215
• WBVar01379425
• WBVar01379424
• WBVar01685647
• WBVar01685646
• WBVar01685648
• WBVar01836412
• gk679636
• gk420760
• WBVar01892341
• WBVar01685645
• WBVar01836413
• gk157408
• gk875996
• gk157407
• gk828876
• WBVar01766741
• gk907427
• gk871887
• gk157406
• gk798038
• WBVar00554404
• gk550414
• WBVar00106209
• WBVar00177759
• WBVar00177760

1 Chromosome

• WormBase ID: II
• Organism: Caenorhabditis elegans
• Length (nt): 15279421

1 Chromosome Location

• Feature . Primary Identifier: WBGene00005287
• Start: 12510682
• End: 12511814
• Strand: 1

2 Data Sets

• WormBaseAcedbConverter
• C. elegans genomic annotations (GFF3 Gene)

1 Downstream Intergenic Region

• WormBase ID: intergenic_region_chrII_12511815..12512165
• Length (nt): 351
• Chromosome Location: II: 12511815-12512165
• Organism: Caenorhabditis elegans

3 Expression Clusters

Regulated By Treatment	Description	Algorithm	Primary Identifier
	Down-regulated genes (fold change > 1.5) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2.	Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off.	WBPaper00045774:clk-1_downregulated
	Genes identified as up-regulated at a 5% false discovery rate through RNAseq experiments with three tatn-1(qd182) and three N2 RNA samples.	ANOVA with FDR <= 0.05.	WBPaper00044656:tatn-1(qd182)_upregulated
	Down-regulated genes (fold change > 1.5), non-rescued by CoQ10 supplementation (-10 +10 %) in two CoQ-deficient clk-1 mutant strains (e2519, qm30) compared to wild types N2.	Fold-changes of intensities were calculated from the arithmetic mean of gene expression values between experimental and corresponding control group. Fold change >= 1.5 was used as cut-off.	WBPaper00045774:clk-1_downregulated_CoQ10_independent

0 Expression Patterns

0 GO Annotation

0 Homologues

1 Locations

• Feature . Primary Identifier: WBGene00005287
• Start: 12510682
• End: 12511814
• Strand: 1

0 Ontology Annotations

0 Regulates Expr Cluster

1 Sequence

• Length: 1133

1 Sequence Ontology Term