WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y46G5A.22a Sequence Name  Y46G5A.22a
Length (nt)  888   Chromosome Location  II: 12816939-12817067
Chromosome . Primary Identifier  II Chromosome Location . Start  12816939
Chromosome Location . End  12817067
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y46G5A.22a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE21999 Y46G5A.22, isoform a 34.2 295 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00056680
WBRNAi00056681
WBRNAi00020669
WBRNAi00037134

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y46G5A.22a 12816939 12817067 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012912 Y46G5A.22 Y46G5A.22 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y46G5A.22a 12816939 12817067 -1
CDS:Y46G5A.22a 12817127 12817318 -1
CDS:Y46G5A.22a 12817365 12817557 -1
CDS:Y46G5A.22a 12818034 12818192 -1
CDS:Y46G5A.22a 12818248 12818412 -1
CDS:Y46G5A.22a 12818498 12818547 -1

1 Sequence

Length
888

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y46G5A.22a.1 Y46G5A.22a.1 1048   II: 12816820-12818588