WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y38F1A.3 Sequence Name  Y38F1A.3
Length (nt)  2688   Chromosome Location  II: 12965568-12965689
Chromosome . Primary Identifier  II Chromosome Location . Start  12965568
Chromosome Location . End  12965689
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y38F1A.3

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43376 PTR-18 101.9 895 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056034
WBRNAi00076958
WBRNAi00076926
WBRNAi00076936
WBRNAi00020292

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y38F1A.3 12965568 12965689 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004232 ptr-18 Y38F1A.3 Caenorhabditis elegans

11 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y38F1A.3 12965568 12965689 1
CDS:Y38F1A.3 12966557 12966631 1
CDS:Y38F1A.3 12966682 12966807 1
CDS:Y38F1A.3 12970734 12970994 1
CDS:Y38F1A.3 12971109 12971205 1
CDS:Y38F1A.3 12972095 12972358 1
CDS:Y38F1A.3 12972866 12972975 1
CDS:Y38F1A.3 12973795 12974586 1
CDS:Y38F1A.3 12976611 12976974 1
CDS:Y38F1A.3 12977026 12977229 1
CDS:Y38F1A.3 12977621 12977893 1

1 Sequence

Length
2688

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y38F1A.3.1 Y38F1A.3.1 2988   II: 12965546-12978171