WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48C3A.5a Sequence Name  Y48C3A.5a
Length (nt)  1764   Chromosome Location  II: 13272634-13272774
Chromosome . Primary Identifier  II Chromosome Location . Start  13272634
Chromosome Location . End  13272774
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48C3A.5a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38245 Y48C3A.5, isoform a 66.8 587 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00002217
WBRNAi00056903
WBRNAi00037247

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
CDS:Y48C3A.5a 13272634 13272774 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012989 Y48C3A.5 Y48C3A.5 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier 		Start End Strand
CDS:Y48C3A.5a 13272634 13272774 1
CDS:Y48C3A.5a 13278175 13278299 1
CDS:Y48C3A.5a 13279046 13279275 1
CDS:Y48C3A.5a 13279626 13279768 1
CDS:Y48C3A.5a 13299696 13299794 1
CDS:Y48C3A.5a 13300511 13301097 1
CDS:Y48C3A.5a 13302234 13302358 1
CDS:Y48C3A.5a 13302702 13302795 1
CDS:Y48C3A.5a 13303170 13303283 1
CDS:Y48C3A.5a 13303985 13304090 1

1 Sequence

Length
1764

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48C3A.5a.1 Y48C3A.5a.1 1898   II: 13272634-13304224