WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48E1B.3c Sequence Name  Y48E1B.3c
Length (nt)  1929   Chromosome Location  II: 13555252-13555486
Chromosome . Primary Identifier  II Chromosome Location . Start  13555252
Chromosome Location . End  13555486
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE51979 Y48E1B.3, isoform c 73.1 642 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00056918
WBRNAi00056920
WBRNAi00020755
WBRNAi00037254
WBRNAi00061386

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48E1B.3c 13555252 13555486 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013002 Y48E1B.3 Y48E1B.3 Caenorhabditis elegans

6 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48E1B.3c 13555252 13555486 -1
CDS:Y48E1B.3c 13557547 13558001 -1
CDS:Y48E1B.3c 13560399 13561205 -1
CDS:Y48E1B.3c 13562654 13562845 -1
CDS:Y48E1B.3c 13562907 13562970 -1
CDS:Y48E1B.3c 13564364 13564539 -1

1 Sequence

Length
1929

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48E1B.3c.1 Y48E1B.3c.1 2469   II: 13555126-13567971