WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48E1B.7 Sequence Name  Y48E1B.7
Length (nt)  2103   Chromosome Location  II: 13575931-13575958
Chromosome . Primary Identifier  II Chromosome Location . Start  13575931
Chromosome Location . End  13575958
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.7

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE43878 LIN-38 81.6 700 Caenorhabditis elegans
 

Other

5 RNAi

WormBase ID
WBRNAi00038608
WBRNAi00056923
WBRNAi00020756
WBRNAi00037256
WBRNAi00056922

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48E1B.7 13575931 13575958 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013006 lin-38 Y48E1B.7 Caenorhabditis elegans

9 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48E1B.7 13575931 13575958 1
CDS:Y48E1B.7 13576011 13576114 1
CDS:Y48E1B.7 13576166 13576299 1
CDS:Y48E1B.7 13577751 13578315 1
CDS:Y48E1B.7 13580014 13580231 1
CDS:Y48E1B.7 13580928 13581064 1
CDS:Y48E1B.7 13581532 13581642 1
CDS:Y48E1B.7 13582646 13582871 1
CDS:Y48E1B.7 13583911 13584490 1

1 Sequence

Length
2103

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48E1B.7.1 Y48E1B.7.1 3142   II: 13575925-13585523