WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48E1B.11.1 Sequence Name  Y48E1B.11.1
Length (nt)  955   Chromosome Location  II: 13595003-13596555
Chromosome . Primary Identifier  II Chromosome Location . Start  13595003
Chromosome Location . End  13596555 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.11.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013009 fbxc-23 Y48E1B.11 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48E1B.11 Y48E1B.11 885   II: 13595061-13595148

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48E1B.11.1 13595003 13596555 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

5 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon73548   146   II: 13595003-13595148 Caenorhabditis elegans
Exon73549   266   II: 13595196-13595461 Caenorhabditis elegans
Exon73550   183   II: 13595511-13595693 Caenorhabditis elegans
Exon73551   295   II: 13596155-13596449 Caenorhabditis elegans
Exon73552   65   II: 13596491-13596555 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48E1B.11.1 13595003 13596555 -1

1 Sequence

Length
955

1 Sequence Ontology Term

Identifier Name Description
transcript