WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y48E1B.12 Sequence Name  Y48E1B.12
Length (nt)  750   Chromosome Location  II: 13596956-13597022
Chromosome . Primary Identifier  II Chromosome Location . Start  13596956
Chromosome Location . End  13597022
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48E1B.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE14874 CSC-1 26.8 249 Caenorhabditis elegans
 

Other

15 RNAi

WormBase ID
WBRNAi00073660
WBRNAi00073662
WBRNAi00073665
WBRNAi00073664
WBRNAi00072743
WBRNAi00056913
WBRNAi00064166
WBRNAi00037253
WBRNAi00072745
WBRNAi00072744
WBRNAi00073661
WBRNAi00073663
WBRNAi00073667
WBRNAi00073666
WBRNAi00061527

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y48E1B.12 13596956 13597022 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000804 csc-1 Y48E1B.12 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y48E1B.12 13596956 13597022 1
CDS:Y48E1B.12 13597076 13597364 1
CDS:Y48E1B.12 13597423 13597518 1
CDS:Y48E1B.12 13597577 13597874 1

1 Sequence

Length
750

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y48E1B.12.1 Y48E1B.12.1 824   II: 13596955-13597947