WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F01D5.10.1 Sequence Name  F01D5.10.1
Length (nt)  1288   Chromosome Location  II: 14017839-14021330
Chromosome . Primary Identifier  II Chromosome Location . Start  14017839
Chromosome Location . End  14021330 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01D5.10.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00008500 F01D5.10 F01D5.10 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F01D5.10 F01D5.10 1044   II: 14017965-14018095

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F01D5.10.1 14017839 14021330 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

8 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74148   257   II: 14017839-14018095 Caenorhabditis elegans
Exon74149   158   II: 14018139-14018296 Caenorhabditis elegans
Exon74153   138   II: 14018939-14019076 Caenorhabditis elegans
Exon74155   138   II: 14019136-14019273 Caenorhabditis elegans
Exon74157   143   II: 14019321-14019463 Caenorhabditis elegans
Exon74159   77   II: 14020053-14020129 Caenorhabditis elegans
Exon74161   272   II: 14020687-14020958 Caenorhabditis elegans
Exon74163   105   II: 14021226-14021330 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F01D5.10.1 14017839 14021330 -1

1 Sequence

Length
1288

1 Sequence Ontology Term

Identifier Name Description
transcript