WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y48B6A.7.1 Sequence Name  Y48B6A.7.1
Length (nt)  2065   Chromosome Location  II: 14198046-14205460
Chromosome . Primary Identifier  II Chromosome Location . Start  14198046
Chromosome Location . End  14205460 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y48B6A.7.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000038 ace-4 Y48B6A.7 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y48B6A.7 Y48B6A.7 1809   II: 14198167-14198217

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.7.1 14198046 14205460 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

17 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74363   172   II: 14198046-14198217 Caenorhabditis elegans
Exon74364   107   II: 14198827-14198933 Caenorhabditis elegans
Exon74365   222   II: 14198988-14199209 Caenorhabditis elegans
Exon74366   79   II: 14199258-14199336 Caenorhabditis elegans
Exon74367   117   II: 14200308-14200424 Caenorhabditis elegans
Exon74368   60   II: 14200807-14200866 Caenorhabditis elegans
Exon74369   71   II: 14200924-14200994 Caenorhabditis elegans
Exon74370   124   II: 14201041-14201164 Caenorhabditis elegans
Exon74371   110   II: 14201627-14201736 Caenorhabditis elegans
Exon74372   101   II: 14201804-14201904 Caenorhabditis elegans
Exon74373   67   II: 14202041-14202107 Caenorhabditis elegans
Exon74374   193   II: 14203522-14203714 Caenorhabditis elegans
Exon74375   86   II: 14203792-14203877 Caenorhabditis elegans
Exon74376   156   II: 14204695-14204850 Caenorhabditis elegans
Exon74377   69   II: 14204951-14205019 Caenorhabditis elegans
Exon74378   107   II: 14205068-14205174 Caenorhabditis elegans
Exon74379   224   II: 14205237-14205460 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y48B6A.7.1 14198046 14205460 1

1 Sequence

Length
2065

1 Sequence Ontology Term

Identifier Name Description
transcript