WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G11A.3.1 Sequence Name  Y54G11A.3.1
Length (nt)  1735   Chromosome Location  II: 14276621-14283979
Chromosome . Primary Identifier  II Chromosome Location . Start  14276621
Chromosome Location . End  14283979 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G11A.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013214 Y54G11A.3 Y54G11A.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G11A.3 Y54G11A.3 1515   II: 14276714-14276741

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.3.1 14276621 14283979 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74445   121   II: 14276621-14276741 Caenorhabditis elegans
Exon74446   249   II: 14276800-14277048 Caenorhabditis elegans
Exon74447   369   II: 14278407-14278775 Caenorhabditis elegans
Exon74449   263   II: 14280617-14280879 Caenorhabditis elegans
Exon74450   314   II: 14281823-14282136 Caenorhabditis elegans
Exon74451   419   II: 14283561-14283979 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.3.1 14276621 14283979 1

1 Sequence

Length
1735

1 Sequence Ontology Term

Identifier Name Description
transcript