WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y54G11A.12.1 Sequence Name  Y54G11A.12.1
Length (nt)  1064   Chromosome Location  II: 14285754-14287377
Chromosome . Primary Identifier  II Chromosome Location . Start  14285754
Chromosome Location . End  14287377 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y54G11A.12.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00005264 srh-41 Y54G11A.12 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y54G11A.12 Y54G11A.12 1038   II: 14285780-14285865

1 Chromosome

WormBase ID Organism Length (nt)
II Caenorhabditis elegans 15279421  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.12.1 14285754 14287377 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon74452   112   II: 14285754-14285865 Caenorhabditis elegans
Exon74453   618   II: 14285914-14286531 Caenorhabditis elegans
Exon74454   334   II: 14287044-14287377 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y54G11A.12.1 14285754 14287377 -1

1 Sequence

Length
1064

1 Sequence Ontology Term

Identifier Name Description
transcript